Scientific publications
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2d6
Terfloth L, Bienfait B, Gasteiger J. "Ligand-Based Models for the Isoform Specificity of Cytochrome P450 3A4, 2D6, and 2C9 Substrates." J. Chem. Inf. Model.. 2007;47(4):1688-1701. Abstract

isoCYP

3a4
Terfloth L, Bienfait B, Gasteiger J. "Ligand-Based Models for the Isoform Specificity of Cytochrome P450 3A4, 2D6, and 2C9 Substrates." J. Chem. Inf. Model.. 2007;47(4):1688-1701. Abstract

isoCYP

3D structure generation
Schwab CH. "Conformations and 3D pharmacophore searching." Drug Discovery Today: Technologies. 2010;7(4):e245-e253. Abstract

CORINA, ROTATE

3D-QSAR
Moro S, Bacilieri M, Ferrari C, Spalluto G. "Autocorrelation of molecular electrostatic potential surface properties combined with partial least squares analysis as alternative attractive tool to generate ligand-based 3D-QSARs." Curr. Drug Disc. Tech.. 2005;2:13-21. Abstract

ADRIANA.Code

Moro S, Spalluto G, Cusan C, et al. "The application of a 3D-QSAR (autoMEP/PLS) approach as an efficient pharmacodynamic-driven filtering method for small-sized virtual library: Application to a lead optimization of a human A3 adenosine receptor antagonist." Bioorg. Med. Chem.. 2006;14(14):4923-4932. Abstract

ADRIANA.Code

5-HT3 receptor
Kornhuber J, Terfloth L, Bleich S, Wiltfang J, Rupprecht R. "Molecular properties of psychopharmacological drugs determining non-competitive inhibition of 5-HT3A receptors." Eur. J. Med. Chem.. 2009;44(6):2667-2672. Abstract

ADRIANA.Code

A3 adenosine receptor antagonist
Moro S, Spalluto G, Cusan C, et al. "The application of a 3D-QSAR (autoMEP/PLS) approach as an efficient pharmacodynamic-driven filtering method for small-sized virtual library: Application to a lead optimization of a human A3 adenosine receptor antagonist." Bioorg. Med. Chem.. 2006;14(14):4923-4932. Abstract

ADRIANA.Code

A3 Adenosine Receptor Antagonists
Moro S, Bacilieri M, Ferrari C, Spalluto G. "Autocorrelation of molecular electrostatic potential surface properties combined with partial least squares analysis as alternative attractive tool to generate ligand-based 3D-QSARs." Curr. Drug Disc. Tech.. 2005;2:13-21. Abstract

ADRIANA.Code

Antidepressant drugs
Kornhuber J, Terfloth L, Bleich S, Wiltfang J, Rupprecht R. "Molecular properties of psychopharmacological drugs determining non-competitive inhibition of 5-HT3A receptors." Eur. J. Med. Chem.. 2009;44(6):2667-2672. Abstract

ADRIANA.Code

Antipsychotic drugs
Kornhuber J, Terfloth L, Bleich S, Wiltfang J, Rupprecht R. "Molecular properties of psychopharmacological drugs determining non-competitive inhibition of 5-HT3A receptors." Eur. J. Med. Chem.. 2009;44(6):2667-2672. Abstract

ADRIANA.Code

Autocorrelation Vectors
Moro S, Bacilieri M, Ferrari C, Spalluto G. "Autocorrelation of molecular electrostatic potential surface properties combined with partial least squares analysis as alternative attractive tool to generate ligand-based 3D-QSARs." Curr. Drug Disc. Tech.. 2005;2:13-21. Abstract

ADRIANA.Code

biologically-relevant conformations
Renner S, Schwab CH, Gasteiger J, Schneider G. "Impact of Conformational Flexibility on Three-Dimensional Similarity Searching Using Correlation Vectors." Journal of Chemical Information and Modeling. 2006;46(6):2324-2332.

CORINA, ROTATE

Schwab CH. "Conformations and 3D pharmacophore searching." Drug Discovery Today: Technologies. 2010;7(4):e245-e253. Abstract

CORINA, ROTATE

Comparative Molecular Field Analysis (CoMFA)
Moro S, Bacilieri M, Ferrari C, Spalluto G. "Autocorrelation of molecular electrostatic potential surface properties combined with partial least squares analysis as alternative attractive tool to generate ligand-based 3D-QSARs." Curr. Drug Disc. Tech.. 2005;2:13-21. Abstract

ADRIANA.Code

COMPUTATIONAL MODELS
Anzali S, Berthold MR, Fioravanzo E, et al. "Development of computational models for the risk assessment of cosmetic ingredients." IFSCC Magazine. 2012;15:249-255. Abstract
conformational analysis
Renner S, Schwab CH, Gasteiger J, Schneider G. "Impact of Conformational Flexibility on Three-Dimensional Similarity Searching Using Correlation Vectors." Journal of Chemical Information and Modeling. 2006;46(6):2324-2332.

CORINA, ROTATE

Schwab CH. "Conformations and 3D pharmacophore searching." Drug Discovery Today: Technologies. 2010;7(4):e245-e253. Abstract

CORINA, ROTATE

Conformations
Schwab CH. "Conformations and 3D pharmacophore searching." Drug Discovery Today: Technologies. 2010;7(4):e245-e253. Abstract

CORINA, ROTATE

Renner S, Schwab CH, Gasteiger J, Schneider G. "Impact of Conformational Flexibility on Three-Dimensional Similarity Searching Using Correlation Vectors." Journal of Chemical Information and Modeling. 2006;46(6):2324-2332.

CORINA, ROTATE

COSMETIC INGREDIENTS LNVENTORY
Anzali S, Berthold MR, Fioravanzo E, et al. "Development of computational models for the risk assessment of cosmetic ingredients." IFSCC Magazine. 2012;15:249-255. Abstract
cytochrome
Terfloth L, Bienfait B, Gasteiger J. "Ligand-Based Models for the Isoform Specificity of Cytochrome P450 3A4, 2D6, and 2C9 Substrates." J. Chem. Inf. Model.. 2007;47(4):1688-1701. Abstract

isoCYP

eTOX
Briggs K, Cases M, Heard DJ, et al. "Inroads to Predict in Vivo Toxicology-An Introduction to the eTOX Project." Int. J. Mol. Sci.. 2012;13(3). Abstract
Feature Trees
Zaliani A, Boda K, Seidel T, et al. "Second-generation de novo design: a view from a medicinal chemist perspective." J. Comput. Aided Mol. Des.. 2009;23(8):593-602. Abstract

SYLVIA

FlexNovo
Zaliani A, Boda K, Seidel T, et al. "Second-generation de novo design: a view from a medicinal chemist perspective." J. Comput. Aided Mol. Des.. 2009;23(8):593-602. Abstract

SYLVIA

Fragment space
Zaliani A, Boda K, Seidel T, et al. "Second-generation de novo design: a view from a medicinal chemist perspective." J. Comput. Aided Mol. Des.. 2009;23(8):593-602. Abstract

SYLVIA