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biologically-relevant conformations
Renner S, Schwab CH, Gasteiger J, Schneider G. "Impact of Conformational Flexibility on Three-Dimensional Similarity Searching Using Correlation Vectors." Journal of Chemical Information and Modeling. 2006;46(6):2324-2332.

CORINA, ROTATE

Schwab CH. "Conformations and 3D pharmacophore searching." Drug Discovery Today: Technologies. 2010;7(4):e245-e253. Abstract

CORINA, ROTATE